DNA Plasmodium
genomic · 37 views
genomicsymbolic
What It Is
P. falciparum chr1 (NC_004325). Malaria parasite with extreme AT bias (GC ~21%); 640kb contig.
Interpretation
Standard analysis sees: bounded / light-tailed; few distinct values; multifractal. The atlas finds no named structure, but the source is distinctively extreme on Cantor Set:mean_gap (-4.7z) — beyond what the standard bank predicts for it.
What standard analysis sees
tail heaviness0.06
asymmetry0.70
occupancy0.12
short-range corr0.22
long-range memory0.56
spectral colour0.60
periodicity0.33
complexity0.54
time-irreversibility0.77
volatility clustering0.39
multifractality0.86
dimensionality0.65
nonstationarity0.46
What the atlas adds
Atlas-extreme metrics the standard bank can’t predict for this source
Cantor Set:mean_gap | -4.7z | bank-miss 1.2σ |
Spectral Graph:spectral_dim | +3.2z | bank-miss 1.5σ |
Composition
dtypeuint8
range[65, 84]
unique values4 / 16384
mean ± std72.2 ± 8.39
Fixed alphabet — only 4 distinct symbols across 16384 samples.
Render Gallery
Native > phase_plotraw
Native > timeseriesraw
Native > triple_latticeraw
Boltzmann > lag_map
Boltzmann > spin_grid
Cayley > default
Chladni > free_plate_nodal
Chladni > plate_bottom
Chladni > plate_top
_(centered)/signed_log_z/DNA_Plasmodium.png)
Heisenberg (Nil) (centered) > signed_log_z
_(centered)/xy_path/DNA_Plasmodium.png)
Heisenberg (Nil) (centered) > xy_path
Hodge–Laplacian > default
/barcode/DNA_Plasmodium.png)
Inflation (Substitution) > barcode
/d_curve/DNA_Plasmodium.png)
Inflation (Substitution) > d_curve
Information Theory > default
Julia Set > escape_histogram
Klein Bottle > default
Laplacian > default
Logarithmic Spiral > default
Möbius-S³ > mobius_cylinder
Möbius-S³ > s2_base_map
Ordinal Partition > default
/phi_spectrum/DNA_Plasmodium.png)
Penrose (Quasicrystal) > phi_spectrum
Persistent Homology > barcode
Persistent Homology > h1_diagram
Predictability > default
Recurrence Quantification > default
Spectral Analysis > default
Spectral Graph > default
Spirograph > mode_spectrum
Spirograph > phasor_trajectory
Symplectic > flux_grid
Symplectic > phase_space
/default/DNA_Plasmodium.png)
Ulam Spiral (Sacks) > default
/default/DNA_Plasmodium.png)
Ulam Spiral (Square) > default
Visibility Graph > default
Wavelet Cascade > default
Which Geometries Light Up
Mostow Rigidity › Mostow Rigidity:laplacian_perturbation_stability | rank 2/306 | 1.0000 |
Spectral Graph › Spectral Graph:spectral_dim | rank 5/306 | 1.9277 |
← / → within domain · ⇧← / ⇧→ alphabetical · ⇧← / ⇧→ inside an open render = same view across sources