DNA Plasmodium

genomic · 37 views
genomicsymbolic

What It Is

P. falciparum chr1 (NC_004325). Malaria parasite with extreme AT bias (GC ~21%); 640kb contig.

Interpretation

Standard analysis sees: bounded / light-tailed; few distinct values; multifractal. The atlas finds no named structure, but the source is distinctively extreme on Spectral Graph:spectral_dim (+3.2z) — beyond what the standard bank predicts for it.

What standard analysis sees
tail heaviness0.05
asymmetry0.67
occupancy0.10
short-range corr0.31
long-range memory0.55
spectral colour0.60
periodicity0.28
complexity0.51
time-irreversibility0.73
volatility clustering0.38
multifractality0.90
dimensionality0.76
nonstationarity0.34
What the atlas adds
Atlas-extreme metrics the standard bank can’t predict for this source
Spectral Graph:spectral_dim+3.2zbank-miss 1.2σ

Composition

dtypeuint8
range[65, 84]
unique values4 / 16384
mean ± std72.2 ± 8.39

Fixed alphabet — only 4 distinct symbols across 16384 samples.

Render Gallery

Atlas Position

Nearest neighborDistance
DNA Dog2.78
DNA SARS-CoV-23.15
DNA Human3.19

Open in Atlas →

Which Geometries Light Up

Mostow RigidityMostow Rigidity:laplacian_perturbation_stabilityrank 2/3071.0000
Spectral GraphSpectral Graph:spectral_dimrank 5/3071.9277
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