DNA Chimp

genomic · 37 views
genomicsymbolic

What It Is

Chimpanzee chr1 genomic DNA (Clint_PTRv2). 500kb contiguous, GC ~52%; GC-richer than the human chr1 contig (~44%).

Interpretation

Standard analysis sees: few distinct values. The atlas finds no named structure, but the source is distinctively extreme on Marginal:tail_occupancy_r1_5 (+2.7z) — beyond what the standard bank predicts for it.

What standard analysis sees
tail heaviness0.39
asymmetry0.82
occupancy0.14
short-range corr0.39
long-range memory0.53
spectral colour0.60
periodicity0.24
complexity0.63
time-irreversibility0.81
volatility clustering0.18
multifractality0.85
dimensionality0.40
nonstationarity0.48
What the atlas adds
Atlas-extreme metrics the standard bank can’t predict for this source
Marginal:tail_occupancy_r1_5+2.7zbank-miss 2.7σ

Composition

dtypeuint8
range[65, 84]
unique values4 / 16384
mean ± std71.4 ± 7.06

Fixed alphabet — only 4 distinct symbols across 16384 samples.

Render Gallery

Atlas Position

Nearest neighborDistance
DNA Dog2.09
DNA Human2.12
DNA Phage Lambda2.12

Open in Atlas →

Which Geometries Light Up

MarginalMarginal:tail_occupancy_r1_5rank 4/3070.2415
Spectral GraphSpectral Graph:spectral_dimrank 3/3071.9641
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