DNA Chimp

genomic · 37 views
genomicsymbolic

What It Is

Chimpanzee chr1 genomic DNA (Clint_PTRv2). 500kb contiguous, GC ~52%; GC-richer than the human chr1 contig (~44%).

Interpretation

Standard analysis sees: few distinct values; homoskedastic; multifractal. The atlas finds no named structure, but the source is distinctively extreme on Marginal:tail_occupancy_r1_5 (+2.6z) — beyond what the standard bank predicts for it.

What standard analysis sees
tail heaviness0.50
asymmetry0.82
occupancy0.14
short-range corr0.41
long-range memory0.51
spectral colour0.62
periodicity0.22
complexity0.65
time-irreversibility0.82
volatility clustering0.14
multifractality0.85
dimensionality0.42
nonstationarity0.47
What the atlas adds
Atlas-extreme metrics the standard bank can’t predict for this source
Marginal:tail_occupancy_r1_5+2.6zbank-miss 2.4σ

Composition

dtypeuint8
range[65, 84]
unique values4 / 16384
mean ± std71.4 ± 7.06

Fixed alphabet — only 4 distinct symbols across 16384 samples.

Render Gallery

Atlas Position

Nearest neighborDistance
DNA Dog2.09
DNA Human2.12
DNA Phage Lambda2.17

Open in Atlas →

Which Geometries Light Up

Marginal › Marginal:tail_occupancy_r1_5rank 4/3060.2415
Spectral Graph › Spectral Graph:spectral_dimrank 3/3061.9641
in genomic
alphabetical
← / → within domain · ⇧← / ⇧→ alphabetical · ⇧← / ⇧→ inside an open render = same view across sources